skill-tree:use:1:4:b
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- | # USE1.4-B Software Environment | + | # USE1.4 |
- | # Background | + | |
- | HPC systems have generally installed multiple versions of a number of key software tools and software environments. | + | |
- | Package management tools provide access to this rich variety of software. | + | |
- | A user has to load the software for the current shell session to make commands available. | + | |
- | The widely available software | + | An HPC system is accessed remotely and has its particular file systems that contain data and programs to execute. |
- | * Environment modules | + | Learning the ways of general interaction with the remote system and the tools involved is essential for newcomers. |
- | * Spack | + | |
- | # Aim | + | Users must connect to an HPC system typically using the Secure Shell (SSH), which then starts a shell and allows the interactive access. |
- | * To utilize different package management tools to make software available | + | When the user disconnects, |
+ | A server-sided session that persists after disconnection enables the user to execute long-running programs remotely and allows the continuation of a previous session seamlessly. | ||
+ | Data transfer between a local user system (e.g., desktop or laptop) and a remote system requires special tools. | ||
+ | Interactive access is also allowed. | ||
- | # Outcomes | + | The tools discussed here are generally valid for systems using Linux, Mac, Windows, and also mobile devices. |
- | * Understand shell variables relevant for executing software | + | |
- | * Query available software | + | ## Requirements |
- | * Select | + | |
+ | ## Learning | ||
+ | |||
+ | * Describe how SSH-authentication works: | ||
+ | * Password authentication. | ||
+ | * Public-key authentication. | ||
+ | * The role of an authentication agent and the security implications. | ||
+ | * Generate an SSH public/ | ||
+ | * Register a key for public-key authentication using ssh-copy-id. | ||
+ | * Perform a remote login from Linux using SSH. | ||
+ | * Use SSH-agent or Windows equivalents. | ||
+ | * Use Agent forwarding to connect to a third HPC system from an HPC system that you logged into with ssh from your computer. | ||
+ | * Know when to use and how to create a config file. | ||
+ | * Utilize tools to transfer data between | ||
+ | * scp | ||
+ | * sftp | ||
+ | * rsync (-avz) | ||
+ | * Describe how SSHFS allows mounting a remote directory to a local directory for interactive usage (Mac/Linux only), e.g. for copying files or to transparently use your favourite graphical text editor on the local computer for editing files on the remote cluster. | ||
+ | * Utilize screen and tmux to preserve a session | ||
+ | * Creation of a session. | ||
+ | * Detaching from the current session. | ||
+ | * Resuming a previous session. | ||
+ | |||
+ | ## Subskills | ||
- | # Subskills | ||
- | * [[skill-tree: | ||
- | * [[skill-tree: | ||
- | * [[skill-tree: |
skill-tree/use/1/4/b.1591369587.txt.gz · Last modified: 2020/06/05 17:06 by 127.0.0.1